Journal Publications
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Journal publications
Posted Sep 9, 2018, 5:16 AM by Val Vullev
Krzeszewski, M.; Espinoza, E. M.; Červinka, C.; Derr, J. B.; Clark, J. A.; Borchardt, D.; Beran, G. J. O.; Gryko, D. T.; Vullev, V. I. "Dipole Effects on Electron Transfer are Enormous" Angew. Chem. Int. Ed. 2018, published online. DOI: 10.1002/anie.201802637 and 10.1002/ange.201802637 Derr, J. B.; Tamayo, J.; Espinoza, E. M.; Clark, J. A.; Vullev, V. I. "Dipole-induced effects on charge transfer and charge transport. Why do molecular electrets matter?" Can. J. Chem. 2018, 96, 843-858. DOI: 10.1139/cjc-2017-0389 Wierzba, A. J.; Wincenciuk, A.; Karczewski, M.; Vullev, V. I.; Gryko, D. "meso-Modified Cobalamins – Synthesis, Structure, and Properties" Chem. - Eur. J. 2018, published online. DOI: 10.1002/chem.201801807 Ryu,H. G.; Mayther, M. F.; Tamayo, J.; Azarias, C.; Espinoza, E. M.; Banasiewicz, M.; Łukasiewicz, Ł. G.; Poronik, Y. M.; Jeżewski, A.; Clark, J.; Derr, J. B.; Ahn, K. H.; Gryko, D. T.; Jacquemin, D.; Vullev, V. I. "Bidirectional Solvatofluorochromism of a Pyrrolo[3,2-b]pyrrole–Diketopyrrolopyrrole Hybrid" J. Phys. Chem. C. 2018, ASAP. DOI: 10.1021/acs.jpcc.7b11194 Espinoza, E. M.; Larsen-Clinton, J. M.; Krzeszewski, M.; Darabedian, N.; Gryko D. T.; Vullev, V. I. "Bioinspired Approach Toward Molecular Electrets: Synthetic Proteome for Materials" Pure Appl. Chem. 2017, 89, 1777–1797. DOI: 10.1515/pac-2017-0309 Gray, V.; Xia, P.; Huang, Z.; Moses, E.; Fast, E.; Fishman, D. A.; Vullev, V. I.; Abrahamsson, M.; Moth-Poulsena, K.; Tang, M. L. "CdS/ZnS Core–Shell Nanocrystal Photosensitizers for Visible to UV Upconversion" Chem. Sci. 2017, 8, 5488–5496. DOI: 10.1039/c7sc01610g Larsen-Clinton, J. M.; Espinoza, E. M.; Mayther, M.; Clark, J.; Tao, C.; Bao, D.; Larino, C. M.; Wurch, M.; Lara, S.; Vullev, V. I. "Fluorinated Aminoanthranilamides: Non-native Amino Acids for Bringing Proteomic Approaches to Charge-Transfer Systems" Phys. Chem. Chem. Phys. 2017, 19, 7871–7876. DOI: 10.1039/C7CP00432J Xia, P.; Huang, Z.; Li, X.; Romero, J. J.; Vullev, V. I.; Pau, G. S. H.; Tang, M. L. "On the Efficacy of Anthracene Isomers for Triplet Transmission from CdSe Nanocrystals" ChemComm 2017, 53, 1241–1244. DOI: 10.1039/C6CC08229G Purc, A.; Espinoza, E. M.; Nazir, R.; Romero, J. J.; Skonieczny, K.; Jeżewski, A.; Larsen, J. M.; Gryko, D. T.; Vullev, V. I. "Gating that Suppresses Charge Recombination – the Role of Mono-N-Arylated Diketopyrrolopyrrole" J. Am. Chem. Soc. 2016, 138, 12826–12832. DOI: 10.1021/jacs.6b04974 Krzeszewski, M.; Kodama, T.; Espinoza, E. M.; Vullev, V. I.; Kubo, T.; Gryko, D. T. "Non-Planar Butterfly-Shaped π-Expanded Pyrrolopyrroles" Chem. Eur. J. 2016, 22, 16478–16488. DOI: 10.1002/chem.201603282 Skonieczny, K.; Jaeduk Yoo, J.; Larsen, J. M.; Espinoza, E. M.; Barbasiewicz, M.; Vullev, V. I.; Lee, C.-H.; Gryko, D. T. "How To Reach Intense Luminescence for Compounds Capable of Excited-State Intramolecular Proton Transfer?" Chem. Eur. J. 2016, 22, 7485–7496. DOI: 10.1002/chem.2015049 44 Mac, J. T.; Nuñez, V.; Burns, J. M.; Guerrero, Y. A.; Vullev, V. I.; Anvari, B. "Erythrocyte-Derived Nano-Probes Functionalized with Antibodies for Targeted Near Infrared Fluorescence Imaging of Cancer Cells" Biomedical Optics Express 2016, 7, 1311–1322. DOI: 10.1364/BOE.7.001311 Espinoza, E. M.; Larsen, J. M.; Vullev, V. I. "What Makes Oxidized N-Acylanthranilamides Stable?" J. Phys. Chem. Lett. 2016, 7, 758–764. DOI: 10.1021/acs.jpclett.5b02881 Espinoza, E. M.; Xia, B.; Darabedian, N.; Larsen, J. M.; Nuñez, V.; Bao, D.; Mac, J. T.; Botero, F.; Wurch, M.; Zhou, F.; Vullev, V. I. "Nitropyrene Photoprobes: Making Them, and What Are They Good for?" Eur. J. Org. Chem. 2016, 343–356. DOI: 10.1002/ejoc.201501339 Gorham, R. D.; Nunez, V.; Lin, J.-H.; Rooijakkers, S. H. M.; Vullev, V. I.; Morikis, D. "Discovery of Small Molecules for Fluorescent Detection of Complement Activation Product C3d" J. Med. Chem. 2015, 58, 9535–9545. DOI: 10.1021/acs.jmedchem.5b01062 Nuñez, V.; Vullev, V. I. "Chemical Aspects of Biocompatible Interfaces," Encyclopedia of Surface and Colloid Science, Third Edition 2015, pp. 1-22. Guerrero, Y. A.; Bahmani; B.; Singh, S. P.; Vullev, V. I.; Kundra, V.; Anvari, B. "Virus-Resembling Nano-Structures for Near Infrared Fluorescence Imaging of Ovarian Cancer HER2 Receptors," Nanotechnology 2015, 26, 435102 (11pp). DOI: 10.1088/0957-4484/26/43/435102 Larsen, J. M.; Espinoza, E. M.; Hartman, J. D.; Lin, C-K.; Wurch, M.; Maheshwari, P.; Kaushal, R. K.; Marsella, M. J.; Beran, G. J. O.; Vullev, V. I. "Building Blocks for Bioinspired Electrets: Molecular-Level Approach to Materials for Energy and Electronics," Pure Appl. Chem. 2015, 87, 779–792. DOI: 10.1515/pac-2015-0109 Upadhyayula, S.; Nuñez, V.; Espinoza, E. M.; Larsen, J. M.; Bao, D.; Shi, D.; Mac, J.; Anvari, B.; Vullev, V. I. "Photoinduced Dynamics of a Cyanine Dye: Parallel Pathways of Non-radiative Deactivation Involving Multiple Excited-State Twisted Transients," Chem. Sci. 2015, 6, 2237–2251. DOI: 10.1039/C4SC02881C Larsen, J. M.; Espinoza, E. M.; Vullev, V. I. "Bioinspired Molecular Electrets: Bottom-up Approach to Energy Materials and Applications," J. Photon. Energy. 2015, 5(1), 055598. DOI:10.1117/1.JPE.5.055598 Bao, D.; Upadhyayula, S.; Larsen, J. M.; Xia, B.; Georgieva, B.; Nuñez, V.; Espinoza, E. M.; Hartman, J. D.; Wurch, M.; Chang, A.; Lin, C.-K.; Larkin, J.; Vasquez, K.; Beran, G. J. O.; Vullev, V. I. "Dipole-Mediated Rectification of Intramolecular Photoinduced Charge Separation and Charge Recombination," J. Am. Chem. Soc. 2014, 136, 12966–12973. DOI: 10.1021/ja505618n Bahmani, B.; Guerrero, Y.; Bacon, D.; Kundra, V.; Vullev, V. I.; Anvari, B. "Functionalized Polymeric Nanoparticles Loaded with Indocyanine Green as Theranostic Materials for Targeted Molecular Near Infrared Fluorescence Imaging and Photothermal Destruction of Ovarian Cancer Cells," Lasers in Surgery and Medicine 2014, 46, 582-592. DOI: 10.1002/lsm.22269 Lock, J. Y.; Wyatt, E.; Upadhyayula, S.; Whall, A.; Nuñez, V.; Vullev, V.; Liu, H. “Degradation and Antimicrobial Properties of Magnesium Alloys in Artificial Urine for Potential Resorbable Ureteral Stent Applications,” J. Biomed. Mater. Res., Part A 2014, 102 (3), 781-792. DOI: 10.1002/jbm.a.34741 Jung, B.; Vullev, V. I.; Anvari, B. "Revisiting Indocyanine Green: Effects of Serum and Physiological Temperature on Absorption and Fluorescence Characteristics," IEEE Journal of Selected Topics in Quantum Electronics, 2014, 20, 7000409/1-7000409/9. DOI: 10.1109/JSTQE.2013.2278674.Nuñez, V.; Upadhyayula, S.; Millare, B.; Hadian,
Ali.; Shin, S.; Vandrangi, P.; Gupta, S.; Xu, H.; Lin, A.; Larsen, J.;
Georgiev, G. Y.; Vullev, V. I. “Microfluidic space-domain time-resolved emission
spectroscopy of terbium (III) and europium (III) chelates with
pyridine-2,6-dicarboxylate,” Analytical
Chemistry 2013, 85, 4567-4577. DOI: 10.1021/ac400200x.Guo, S.; Bao, D.; Upadhyayula, S.; Wang, W.; Guvenc, A.
B.; Kyle, J. R.; Bay, H.; Bozhilov, K.;Vullev, V.; Ozkan, C.; Ozkan, M. “Photoinduced
Electron Transfer between Pyridine-Coated Cadmium Selenide Quantum Dots and
Single-Sheet Graphene,” Adv. Funct. Mat.
2013, 23 (41), 5199-5211. DOI: 10.1002/adfm.201203652Bahmani, B.; Lytle, C.; Walker, A.; Gupta, S.; Vullev, V.; Anvari, B. “Effects of nanoencapsulation and PEGylation on biodistribution of indocyanine green in healthy mice: quantitative fluorescence imaging and analysis of organs” Int. J. Nanomed., 2013, 8, 1609-1620. DOI: 10.2147/IJN.S42511 Gupta, S.; Chatni, M. R.; Rao, A. L. N.; Vullev, V. I.; Wang, L. V.; Anvari, B. “Virus-Mimicking Nano-constructs as a Contrast Agent for Near Infrared Photoacoustic Imaging,” Nanoscale, 2013, 5 (5), 1772-1776. DOI: 10.1039/c3nr34124k Xia, B.; Bao, D.; Upadhyayula, S.; Jones II, G.; Vullev, V., "Anthranilamides as Bioinspired Molecular Electres: Experimental Evidence for a Permanent Ground-State Electric Dipole Moment," J. Org. Chem. 2013, 78 (5), 1994-2004. DOI: 10.1021/jo301942g Wang, W.; Guo, S.; Penchev, M.; Zhong, J.; Lin, J.; Bao, D.; Vullev, V.; Ozkan, M.; Ozkan, C. S., "Hybrid Low Resistance Ultracapacitor Electrodes Based on 1-Pyrenebutyric Acid Functionalized Centimeter-Scale Graphene Sheets," J. Nanosci. Nanotechnol. 2012, 12 (9), 6913-6920. DOI: 10.1166/jnn.2012.6507 Lin, J.; Zhong, J.; Bao, D.; Reiber-Kyle, J.; Wang, W.; Vullev, V.; Ozkan, M.; Ozkan, C. S. "Supercapacitors based on pillared graphene nanostructures," J. Nanosci. Nanotechnol. 2012, 12, 1770-1775. DOI: http://dx.doi.org/10.1166/jnn.2012.5198Ghazinejad, M.; Kyle, J. R.; Guo, S.; Guvenc, A.; Pleskot, D.; Bao, D.; Vullev, V. I.; Ozkan, M.; Ozkan, C. S. "Non-invasive High-throughput Metrology of Functionalized Graphene Sheets," Adv. Funct. Mater. 2012; 22 (21), 4519-4525. DOI: 10.1002/adfm.201200434Upadhyayula, S.; Quinata, T.; Bishop, S.; Gupta, S.; Jonson, N.; Bahmani, B.; Bozhilov, K.; Stubbs, J.; Jreij, P.; Nallagatla, P.; Vullev, V. "Coatings of Polyethylene Glycol for Suppressing Non-specific Adhesion between Solid Microspheres and Flat Surfaces," Langmuir 2012; 28 (11) 5059-5069; doi: 10.1021/la300545vUpadhyayula, S; Bao, D; Millare, B; Sylvia, S; Habib, K. M. M; Ashraf, M; Ferreira, A; Bishop, S; Bonderer, R; Baqai, S; Jing, X; Penchev, M; Ozkan, M; Ozkan, C; Lake, R; Vullev, V. "Permanent Electric Dipole Moments of Carboxyamides in Condensed Media: What Are the Limitations of Theory and Experiment?,"J. Phys. Chem. B 2011, 115 (30), 9473-9490.Xia, B., Upadhyayula, S., Nunez, V., Landsman, Pavel., Lam, S., Malik, H., Gupta, S., Sarshar, M., Hu, J., Anvari, B., Jones, G., Vullev, V. "Amyloid Histology Stain for Rapid Bacterial Endospore Imaging," Journal of Clinical Microbiology 2011, 49 (8), 2966-2975.Bahmani, B., Gupta, S., Upadhyayula, S., Vullev, V. I., Anvari, B. "Effect of Polyethylene Glycol Coatings on Uptake of Indocyanine Green Loaded Nanocapsules by Human Spleen Macrophages In-Vitro," Journal of Biomedcial Optics 2011, 16 (5), 051303.Vullev, V. I. "From Biomimesis to Bioinspiration: What's the Benefit for Solar-Energy-Conversion Applications?" J. Phys. Chem. Lett. 2011, 2 (5), 503-508.Chau, K.; Millare, B.; Lin, A.; Upadhyayula, S.; Nuñez, V.; Xu, H. and Vullev, V. I. "Dependence of the Quality of Adhesion between Poly(dimethylsiloxane) and Glass Surfaces on the Composition of the Oxidizing Plasma," Microfluidics and Nanofluidics 2011, 10 (4), 907-917. Bao, D.; Ramu, S.; Contreras, A.; Upadhyayula, S.; Vasquez, J.M.; Beran, G. and Vullev, V. I. "Electrochemical Reduction of Quinones: Interfacing Experiment and Theory for Defining Effective Radii of Redox Moieties," J. Phys. Chem. B 2010, 114, 14467-14479. Thomas, M. S.; Nunez, V.; Upadhyayula, S.; Zielins, E.; Bao, D.; Vasquez, J.M.; Bahmani, B. and Vullev, V. I. "Kinetics of Bacterial Fluorescence Staining with 3,3'-Diethylthiacyanine," Langmuir 2010, 26 (12), 9756-9765. Thomas, M. S.; Millare, B.; Clift, J. M.; Bao, D.; Hong, C. and Vullev, V. I. "Print-and-Peel Fabrication for Microfluidics: What’s in for Biomedical Applications?," Ann. Biomed. Eng. 2010, 38, 21-32.Thomas, M. S.; Clift, J. M.; Millare, B.; and Vullev, V. I. "Print-and-Peel Fabricated Passive Micromixers," Langmuir. 2010, 26 (4), 2951-2957. Lu, H.; Bao, D.; Penchev, M.; Ghazinejab, M.; Vullev, V. I.; Ozkan, C.; Ozkan, M. "Pyridine-Coated Lead Sulfide Quantum Dots for Polymer Hybrid Photovoltaic Devices," Adv. Sci. Lett.2010, 3, 101-109. doi:10.1166/asl.2010.1110 Wan, Jiandi; Thomas, Marlon; Guthrie, Sean; Vullev, Valentine I. "Surface-Bound Proteins with Preserved Functionality," Ann. Biomed. Eng. 2009, 37, 1190–1205.Hu, Jingqiu; Xia, Bing; Bao, Duoduo; Ferreira, Amy; Wan, Jiandi; Jones, Guilford and Vullev, Valentine I. "Long-Lived Photogenerated States of a-Oligothiophene-Acridinium Dyads Have Triplet Character," J. Phys. Chem. A 2009, 113, 3096–3107. Bao, Duoduo; Millare, Brent; Xia, Wei; Steyer, Benjamin; Gerasimenko, Alexander; Ferreira, Amy; Contreras, Antonio; Vullev, Valentine "Electrochemical Oxidation of Ferrocene: A Strong Dependence on the Concentration of the Supporting Electrolyte for Nonpolar Solvents", J. Phys. Chem. A 2009, 113, 1259-1267.Vasquez, Jacob M; Vu, Andrew; Schultz, Jerome; Vullev, Valentine "Fluorescence Enhancement of Warfarin Induced by Interaction with B-Cyclodextrin", Biotechnology Progress 2009, 25 (4), 906-914.Ashraf, M. K.; Millare, Brent; Gerasimenko, Alexander A.; Bao, Duoduo; Pandey, Rajeev R.; Lake, Roger K.; Vullev, Valentine "Theoretical design of bioinspired macromolecular electrets based on anthranilamide derivatives.", Biotechnology Progress 2009, 25 (5), 915-922.Millare, Brent; Thomas, Marlon; Ferreira, Amy; Xu, Hong; Holesinger, Madison; Vullev, Valentine "Dependence of the Quality of Adhesion between Poly(dimethylsiloxane) and Glass Surfaces on the Conditions of Treatment with Oxygen Plasma", Langmuir 2008, 24, 13218-13224.Hong, Connie; Bao,Duoduo; Thomas, Marlon; Clift, Joseph; Vullev, Valentine "Print-and-Peel Fabrication of Microelectrodes", Langmuir 2008, 24 (16), 8439-8442.Wan, J.; Ferreira, A.; Xia, W.; Chow, C. H.; Takechi, K.; Kamat, P. V.; Jones, G. II and Vullev, V. I. "Solvent Dependence of the Charge-Transfer Properties of a Quaterthiophene-Anthraquinone Dyad",J. Photochem. Biotobiol. A: Chemistry 2008, 197, 364-374.Jones, G., II; Yan, D.; Hu, J.; Wan, J.; Xia, B.; and Vullev, V. I. "Photoinduced Electron Transfer in Arylacridinium Conjugates in a Solid Glass Matrix", J. Phys. Chem., B 2007, 111, 6921-6929.Vullev, V. I.; Wan, J.; Heinrich, V.; Landsman, P.; Bower, P. E.; Xia, B.; Millare, B. and Jones, G., II "Nonlithographic Fabrication of Microfluidic Devices", J. Am. Chem. Soc. 2006, 128, 16062-16072.Mayers, B. T.; Vezenov, D. V.; Vullev, V. I.; Whitesides, G. M. "Arrays and Cascades of Fluorescent Liquid-Liquid Waveguides: Broadband Light Sources for Spectroscopy in Microchannels", Anal. Chem.2005, 77, 1310-1316.Vullev, V. I.; Jiang, H.; and Jones II, G. "Excimer Sensing", In Advanced Concepts in Fluorescence Spectroscopy: Part B: Macromolecular Sensing (Topics in Fluorescence Spectroscopy, Vol. 10), Geddes, C. D. and Lakowicz, J. R. Eds.; Springer Science + Business Media, Inc.; 2005, P211-240.Vullev, V. I. "Modulation of Dissociation Kinetics by External Force: Examination of the Bell Model", J. Biol. Sci. 2005, 5, 744-758.Vullev, V. I.; Jones, G., II "Nanosecond Laser Flash Photolysis: Dealing with Dynamic-Range and Response-Time Limitations of the Detection System", J. Appl. Sci. 2005, 5, 517-526.Jones, G., II; Zhou, X.; Vullev, V. I. (invited publication) "Photoinduced Electron Transfer in Alpha-Helical Polypeptides: Dependence on Conformation and Electron Donor-Acceptor Distance",Photochem. & Photobiol. Sci. 2003, 2, 1080-1087.Vullev, V. I.; Jones, G., II "Photoinduced Electron Transfer in Alkanoylpyrene Aggregates in Conjugated Polypeptides", Tet. Lett. 2002, 43, 8611-8615.Jones, G., II; Vullev, V. I. "Photoinduced Electron Transfer between Non-Native Donor-Acceptor Moieties Incorporated in Synthetic Polypeptide Aggregates", Org. Lett. 2002, 4, 4001-4004.Jones, G., II; Vullev, V. I. (cover of the issue) "Medium Effects on the Photophysical Properties of Terbium(III) Complexes with Pyridine-2,6-dicarboxylate", Photochem. & Photobiol. Sci. 2002, 1, 925-933.Jones, G., II; Vullev, V. I. "Medium Effects on the Stability of Terbium(III) Complexes with Pyridine-2,6-dicarboxylate", J. Phys. Chem. A 2002, 106, 8213-8222.Vullev, V. I.; Jones, J., II (invited review) "Photoinduced Charge Transfer in Helical Polypeptides",Res. Chem. Interm. 2002, 28, 795-815.Jones, G., II; Vullev, V. I. "Contribution of a Pyrene Fluorescence Probe to the Aggregation Propensity of Polypeptides", Org. Lett. 2001, 3, 2457-2460.Jones, G., II; Vullev, V. I. "Ground- and Excited-State Aggregation Properties of a Pyrene Derivative in Aqueous Media", J. Phys. Chem. A 2001, 105, 6402-6406.Jones, G., II; Vullev, V. I.; Braswell, E.; Zhu, D. "Multistep Photoinduced Electron Transfer in a de Novo Helix Bundle. Multimer Self-Assembly of Peptide Chains Including a Chromophore Special Pair",J. Am. Chem. Soc. 2000, 122, 388-389. Jones, G., II; Lu, L.; Vullev, V. I.; Gosztola, D.; Greenfield, S.; Wasielewski, M. "Photoinduced Electron Transfer for Pyrenesulfonamide Conjugates of Tryptophan-Containing Peptides. Mitigation of Fluoroprobe Behavior in N-Terminal Labeling Experiments", Bioorg. Med. Chem. Lett. 1995, 5, 2385-2390.
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Proceedings
Posted Jul 12, 2012, 5:11 PM by Gokul UpadhyayulaLock, J. Y.; Dragonov, M.; Whall, A.; Dhillon, S.; Upadhyayula, S.; Vullev, V.; Liu, H. “Antimicrobial Properties of Biodegradable Magnesium for Next Generation Ureteral Stent Applications,” Proc. IEEE-EMBS 2012; accepted.
Upadhyayula, S.; Lam, S.; Ha, A.; Malik-Chaudhry, H. K.; Vullev, V. “Dynamic Staining of Bacilli Endospores with Thioflavin T,” Proc. IEEE-EMBS 2012, accepted.
Nuñez, V.; Upadhyayula, S.; Lin, A.; Chau, K.; Vullev, V. "Dynamic staining of bacteria at a single-cell level," Proc. SPIE 8018, 80180A 2011; doi:10.1117/12.884186.Bahmani, B.; Gupta, S.; Vullev, V. I.; Anvari, B. “Uptake of PEGylated Indocyanine Green Loaded Nanocapsules by Cells of Reticuloendothelial System,” Proceedings of SPIE 2011, 7910, 79101C.
Gupta, S.; Kumar, T.; Mehta, H.; Bahmani, B.; Vullev, V. I.; Anvari, B. “Effect of Nano-Encapsulation on Photophysical Properties of ICG,” Proceedings of SPIE 2011, 7910, 79100U.
Thomas, M.; Wan, J.; Vullev, V. I. “Immobilization of Proteins on a Glass Surface at High Density,” American Institute of Physics Conference Proceedings (Proceedings of the National Society of Black Physicists) 2009, 1140, 120-126.
Wan, J.; Landsman, P.; Xia, B.; Bower, P. E.; Heinrich, V.; Jones, G., II; Vullev, V. I. “Continuous-Flow Microfluidic Devices for Detection of Bacterial Endospores,” Proceedings of NanoBio (American Society of Mechanical Engineers, Frontiers in Biomedical Devices Conference) 2006, NANOBIO2006-18030, 23-24.